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LOC106306046 mediator of RNA polymerase II transcription subunit 23 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106306046, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106306046
Gene description
mediator of RNA polymerase II transcription subunit 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106306046 in Genome Data Viewer
Location:
chromosome: C7
Exon count:
18
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C7 NC_027754.1 (20479672..20487210, complement)

Chromosome C7 - NC_027754.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-2 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1A-like Neighboring gene probable peroxygenase 7 Neighboring gene dynein light chain 1, cytoplasmic-like Neighboring gene 21 kDa protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027754.1 Chromosome C7 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027754.1 Reference BOL Primary Assembly

    Range
    20479672..20487210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013742498.1 → XP_013597952.1  mediator of RNA polymerase II transcription subunit 23

    UniProtKB/TrEMBL
    A0A0D3D752, A0A3P6ETP8
    Conserved Domains (1) summary
    pfam11573
    Location:633 → 1256
    Med23; Mediator complex subunit 23
Nucleotide Protein
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