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LOC106303506 probable galacturonosyltransferase 3 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106303506, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106303506
Gene description
probable galacturonosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106303506 in Genome Data Viewer
Location:
chromosome: C7
Exon count:
8
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C7 NC_027754.1 (48357004..48360164)

Chromosome C7 - NC_027754.1Genomic Context describing neighboring genes Neighboring gene alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Neighboring gene amino acid transporter ANTL2 Neighboring gene transport and Golgi organization 2 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027754.1 Chromosome C7 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027754.1 Reference BOL Primary Assembly

    Range
    48357004..48360164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013739761.1 → XP_013595215.1  probable galacturonosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A3P6EZ28
    Conserved Domains (1) summary
    cl28622
    Location:45 → 679
    PLN02870; Probable galacturonosyltransferase

  2. XM_013739763.1 → XP_013595217.1  probable galacturonosyltransferase 3 isoform X3

    Conserved Domains (1) summary
    cd06429
    Location:241 → 538
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  3. XM_013739765.1 → XP_013595219.1  probable galacturonosyltransferase 3 isoform X3

    Conserved Domains (1) summary
    cd06429
    Location:241 → 538
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function

  4. XM_013739762.1 → XP_013595216.1  probable galacturonosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A0D3DIJ1
    Conserved Domains (2) summary
    cd06429
    Location:367 → 664
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02910
    Location:44 → 678
    PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase

  5. XM_013739764.1 → XP_013595218.1  probable galacturonosyltransferase 3 isoform X3

    Conserved Domains (1) summary
    cd06429
    Location:241 → 538
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

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