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LOC106300857 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106300857, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106300857
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106300857 in Genome Data Viewer
Location:
chromosome: C6
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C6 NC_027753.1 (35044493..35048071)

Chromosome C6 - NC_027753.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-3-like Neighboring gene coiled-coil domain-containing protein 124 Neighboring gene uncharacterized LOC106298875 Neighboring gene uncharacterized LOC106298095

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027753.1 Chromosome C6 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3; uncharacterized protein LOC106300857

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027753.1 Reference BOL Primary Assembly

    Range
    35044493..35048071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013737111.1 → XP_013592565.1  uncharacterized protein LOC106300857 isoform X1

    UniProtKB/TrEMBL
    A0A0D3CZM4, A0A3P6G018
    Conserved Domains (1) summary
    pfam03407
    Location:395 → 617
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  2. XM_013737112.1 → XP_013592566.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    pfam03407
    Location:277 → 499
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  3. XM_013737113.1 → XP_013592567.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    pfam03407
    Location:277 → 499
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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