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LOC106300752 probable galacturonosyltransferase 15 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106300752, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106300752
Gene description
probable galacturonosyltransferase 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106300752 in Genome Data Viewer
Location:
chromosome: C6
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C6 NC_027753.1 (22066732..22070846, complement)

Chromosome C6 - NC_027753.1Genomic Context describing neighboring genes Neighboring gene citrate synthase 2, peroxisomal-like Neighboring gene agamous-like MADS-box protein AGL1 Neighboring gene uncharacterized LOC106300891 Neighboring gene peroxisomal and mitochondrial division factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027753.1 Chromosome C6 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027753.1 Reference BOL Primary Assembly

    Range
    22066732..22070846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013736958.1 → XP_013592412.1  probable galacturonosyltransferase 15

    UniProtKB/TrEMBL
    A0A0D3CUP3
    Conserved Domains (2) summary
    cd06429
    Location:208 → 519
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02867
    Location:1 → 532
    PLN02867; Probable galacturonosyltransferase
Nucleotide Protein
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