U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106299462 xyloglucan galactosyltransferase KATAMARI1 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106299462, updated on 30-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC106299462
Gene description
xyloglucan galactosyltransferase KATAMARI1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106299462 in Genome Data Viewer
Location:
chromosome: C6
Exon count:
1
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C6 NC_027753.1 (17405691..17407408, complement)

Chromosome C6 - NC_027753.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase T1-like Neighboring gene uncharacterized LOC106299002 Neighboring gene ubiquitin-conjugating enzyme E2 4-like Neighboring gene E3 ubiquitin-protein ligase At3g02290-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_027753.1 Chromosome C6 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
xyloglucan galactosyltransferase KATAMARI1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027753.1 Reference BOL Primary Assembly

    Range
    17405691..17407408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013735556.1 → XP_013591010.1  xyloglucan galactosyltransferase KATAMARI1

    UniProtKB/TrEMBL
    A0A0D3CT83, A0A3P6FTW0
    Conserved Domains (1) summary
    pfam03016
    Location:178 → 509
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases