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LOC106298421 alpha-(1,4)-fucosyltransferase [ Brassica oleracea (wild cabbage) ]

Gene ID: 106298421, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106298421
Gene description
alpha-(1,4)-fucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106298421 in Genome Data Viewer
Location:
chromosome: C6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C6 NC_027753.1 (35902236..35904098)

Chromosome C6 - NC_027753.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106298687 Neighboring gene receptor homology region, transmembrane domain- and RING domain-containing protein 2 Neighboring gene probable alkaline/neutral invertase F Neighboring gene transcription factor TCP22-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027753.1 Chromosome C6 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,4)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027753.1 Reference BOL Primary Assembly

    Range
    35902236..35904098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013734542.1 → XP_013589996.1  alpha-(1,4)-fucosyltransferase

    UniProtKB/TrEMBL
    A0A3P6HE18
    Conserved Domains (1) summary
    pfam00852
    Location:216 → 389
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
Nucleotide Protein
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