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LOC106298287 alpha-1,3/1,6-mannosyltransferase ALG2 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106298287, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106298287
Gene description
alpha-1,3/1,6-mannosyltransferase ALG2
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106298287 in Genome Data Viewer
Location:
chromosome: C6
Exon count:
7
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C6 NC_027753.1 (39046424..39048250, complement)

Chromosome C6 - NC_027753.1Genomic Context describing neighboring genes Neighboring gene anaphase-promoting complex subunit 6 Neighboring gene pathogen-related protein-like Neighboring gene centromere protein X Neighboring gene protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 Neighboring gene epidermis-specific secreted glycoprotein EP1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027753.1 Chromosome C6 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027753.1 Reference BOL Primary Assembly

    Range
    39046424..39048250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013734389.1 → XP_013589843.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A0D3D1N7, A0A3P6H411
    Conserved Domains (1) summary
    cd03805
    Location:11 → 392
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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