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LOC106298218 probable xyloglucan endotransglucosylase/hydrolase protein 26 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106298218, updated on 4-Sep-2024

Summary

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Gene symbol
LOC106298218
Gene description
probable xyloglucan endotransglucosylase/hydrolase protein 26
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: C1
Exon count:
4
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C1 NC_027748.1 (5765247..5766905, complement)

Chromosome C1 - NC_027748.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ATL42 Neighboring gene casein kinase I-like Neighboring gene uncharacterized LOC106300487 Neighboring gene methyltransferase-like protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027748.1 Chromosome C1 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable xyloglucan endotransglucosylase/hydrolase protein 26

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027748.1 Reference BOL Primary Assembly

    Range
    5765247..5766905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013734299.1 → XP_013589753.1  probable xyloglucan endotransglucosylase/hydrolase protein 26

    UniProtKB/TrEMBL
    A0A0D3A3N1
    Conserved Domains (1) summary
    PLN03161
    Location:1 → 292
    PLN03161; Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
Nucleotide Protein
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