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LOC106295887 probable galacturonosyltransferase 13 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106295887, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106295887
Gene description
probable galacturonosyltransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106295887 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C5 NC_027752.1 (46881833..46884881, complement)

Chromosome C5 - NC_027752.1Genomic Context describing neighboring genes Neighboring gene probable WRKY transcription factor 58 Neighboring gene lamin-like protein Neighboring gene 40S ribosomal protein S19-1 Neighboring gene probable mitochondrial-processing peptidase subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027752.1 Chromosome C5 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027752.1 Reference BOL Primary Assembly

    Range
    46881833..46884881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013731886.1 → XP_013587340.1  probable galacturonosyltransferase 13 isoform X1

    UniProtKB/TrEMBL
    A0A3P6AZ68, A0A3P6FPJ2
    Conserved Domains (1) summary
    PLN02870
    Location:1 → 533
    PLN02870; Probable galacturonosyltransferase

  2. XM_013731887.1 → XP_013587341.1  probable galacturonosyltransferase 13 isoform X2

    UniProtKB/TrEMBL
    A0A0D3CNH4, A0A3P6AZ68
    Conserved Domains (1) summary
    PLN02870
    Location:1 → 532
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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