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LOC106295497 chitobiosyldiphosphodolichol beta-mannosyltransferase-like [ Brassica oleracea (wild cabbage) ]

Gene ID: 106295497, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106295497
Gene description
chitobiosyldiphosphodolichol beta-mannosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106295497 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
16
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C5 NC_027752.1 (7971943..7974873, complement)

Chromosome C5 - NC_027752.1Genomic Context describing neighboring genes Neighboring gene molybdenum cofactor sulfurase Neighboring gene post-GPI attachment to proteins factor 3 Neighboring gene uncharacterized LOC106344416 Neighboring gene amyrin synthase LUP2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027752.1 Chromosome C5 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027752.1 Reference BOL Primary Assembly

    Range
    7971943..7974873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013731417.1 → XP_013586871.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A0D3CAT7, A0A3P6GJ45
    Conserved Domains (2) summary
    cd03816
    Location:2 → 456
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:1 → 418
    PLN02275; transferase, transferring glycosyl groups

  2. XM_013731415.1 → XP_013586869.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A0D3CAT7, A0A3P6GJ45
    Conserved Domains (2) summary
    cd03816
    Location:2 → 456
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:1 → 418
    PLN02275; transferase, transferring glycosyl groups

  3. XM_013731418.1 → XP_013586872.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A0D3CAT7, A0A3P6GJ45
    Conserved Domains (2) summary
    cd03816
    Location:2 → 456
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:1 → 418
    PLN02275; transferase, transferring glycosyl groups

  4. XM_013731416.1 → XP_013586870.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A0D3CAT7, A0A3P6GJ45
    Conserved Domains (2) summary
    cd03816
    Location:2 → 456
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:1 → 418
    PLN02275; transferase, transferring glycosyl groups
Nucleotide Protein
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