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LOC106294676 callose synthase 1 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106294676, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106294676
Gene description
callose synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106294676 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
43
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C5 NC_027752.1 (1967845..1978808, complement)

Chromosome C5 - NC_027752.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106296021 Neighboring gene UDP-glycosyltransferase 75B1 Neighboring gene uncharacterized LOC106294288 Neighboring gene uncharacterized LOC106344180

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027752.1 Chromosome C5 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027752.1 Reference BOL Primary Assembly

    Range
    1967845..1978808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013730291.1 → XP_013585745.1  callose synthase 1

    UniProtKB/TrEMBL
    A0A0D3C7V6, A0A3P6EBB1
    Conserved Domains (3) summary
    pfam02364
    Location:1047 → 1803
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:47 → 173
    Vta1; Vta1 like
    pfam14288
    Location:317 → 429
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
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