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LOC106292885 probable dolichol-phosphate mannosyltransferase [ Brassica oleracea (wild cabbage) ]

Gene ID: 106292885, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106292885
Gene description
probable dolichol-phosphate mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106292885 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
8
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C5 NC_027752.1 (10320804..10322778, complement)

Chromosome C5 - NC_027752.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At1g04910 Neighboring gene probable acyl-activating enzyme 1, peroxisomal Neighboring gene uncharacterized LOC106293516 Neighboring gene small nuclear ribonucleoprotein SmD3b-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027752.1 Chromosome C5 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dolichol-phosphate mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027752.1 Reference BOL Primary Assembly

    Range
    10320804..10322778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013728553.1 → XP_013584007.1  probable dolichol-phosphate mannosyltransferase

    UniProtKB/TrEMBL
    A0A0D3CBT3, A0A3P6EUI0
    Conserved Domains (1) summary
    PLN02726
    Location:15 → 246
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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