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LOC106178796 transmembrane and TPR repeat-containing protein 2 [ Lingula anatina ]

Gene ID: 106178796, updated on 21-Dec-2023

Summary

Gene symbol
LOC106178796
Gene description
transmembrane and TPR repeat-containing protein 2
See related
EnsemblRapid:LOC106178796
Gene type
protein coding
RefSeq status
MODEL
Organism
Lingula anatina
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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Genomic context

See LOC106178796 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019775869.1 (612730..642250)
100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013580630.1 (640896..670427)

NW_019775869.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106178799 Neighboring gene pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 Neighboring gene uncharacterized LOC106178758 Neighboring gene WD and tetratricopeptide repeats protein 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
transmembrane and TPR repeat-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LinAna2.0 Primary Assembly

Genomic

  1. NW_019775869.1 Reference LinAna2.0 Primary Assembly

    Range
    612730..642250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013562146.2XP_013417600.1  transmembrane and TPR repeat-containing protein 2

    UniProtKB/TrEMBL
    A0A1S3K4P3
    Related
    XP_013417600.1, XM_013562146.2
    Conserved Domains (5) summary
    COG0457
    Location:491784
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:545573
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:660691
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:289363
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:801862
    TPR_11; TPR repeat