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LOC106166695 ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [ Lingula anatina ]

Gene ID: 106166695, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106166695
Gene description
ubiquinone biosynthesis monooxygenase COQ6, mitochondrial
See related
EnsemblRapid:LOC106166695
Gene type
protein coding
RefSeq status
MODEL
Organism
Lingula anatina
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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Genomic context

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See LOC106166695 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019775536.1 (297241..310623, complement)
100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013578666.1 (247858..268723, complement)

NW_019775536.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain-containing family D member 1-like Neighboring gene pleckstrin homology domain-containing family D member 1-like Neighboring gene protein FAM161A Neighboring gene uncharacterized LOC106166718 Neighboring gene zinc finger protein 143-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization. Luo YJ, et al. Nat Commun, 2015 Sep 18. PMID 26383154, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-octaprenyl-6-methoxyphenol hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquinone biosynthesis monooxygenase COQ6, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LinAna2.0 Primary Assembly

Genomic

  1. NW_019775536.1 Reference LinAna2.0 Primary Assembly

    Range
    297241..310623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013545342.2 → XP_013400796.1  ubiquinone biosynthesis monooxygenase COQ6, mitochondrial

    UniProtKB/TrEMBL
    A0A1S3IS81
    Related
    XP_013400796.1, XM_013545342.2
    Conserved Domains (2) summary
    TIGR01988
    Location:46 → 477
    Ubi-OHases; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
    cl21454
    Location:45 → 473
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases