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LOC106153713 C-terminal-binding protein [ Lingula anatina ]

Gene ID: 106153713, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106153713
Gene description
C-terminal-binding protein
See related
EnsemblRapid:LOC106153713
Gene type
protein coding
RefSeq status
MODEL
Organism
Lingula anatina
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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Genomic context

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See LOC106153713 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019775180.1 (1016006..1026756, complement)
100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013580940.1 (1016006..1026756, complement)

NW_019775180.1Genomic Context describing neighboring genes Neighboring gene SH3 domain-binding protein 2 Neighboring gene tRNA pseudouridine synthase A Neighboring gene macrophage erythroblast attacher Neighboring gene testis-expressed protein 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization. Luo YJ, et al. Nat Commun, 2015 Sep 18. PMID 26383154, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LinAna2.0 Primary Assembly

Genomic

  1. NW_019775180.1 Reference LinAna2.0 Primary Assembly

    Range
    1016006..1026756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013527757.1 → XP_013383211.1  C-terminal-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A1S3HCH2
    Related
    XP_013383211.1, XM_013527757.1
    Conserved Domains (2) summary
    COG1052
    Location:52 → 361
    LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_013527758.1 → XP_013383212.1  C-terminal-binding protein isoform X4

    UniProtKB/TrEMBL
    A0A1S3HAZ4
    Related
    XP_013383212.1, XM_013527758.1
    Conserved Domains (2) summary
    COG1052
    Location:52 → 361
    LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_024076032.1 → XP_023931800.1  C-terminal-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A2R2MNK7
    Related
    XP_023931800.1, XM_024076032.1
    Conserved Domains (1) summary
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_013527756.1 → XP_013383210.1  C-terminal-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A1S3HAV4
    Related
    XP_013383210.1, XM_013527756.1
    Conserved Domains (2) summary
    COG1052
    Location:52 → 361
    LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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