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LOC106140743 irregular chiasm C-roughest protein [ Amyelois transitella ]

Gene ID: 106140743, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106140743
Gene description
irregular chiasm C-roughest protein
See related
EnsemblRapid:LOC106140743
Gene type
protein coding
RefSeq status
MODEL
Organism
Amyelois transitella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Pyralidae; Phycitinae; Amyelois
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Genomic context

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See LOC106140743 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_11 current ilAmyTran1.1 (GCF_032362555.1) 27 NC_083530.1 (3107126..3171139)
100 previous assembly ASM118610v1 (GCF_001186105.1) Unplaced Scaffold NW_013535331.1 (783619..824594, complement)

Chromosome 27 - NC_083530.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106140604 Neighboring gene uncharacterized LOC132903503 Neighboring gene uncharacterized LOC106140450 Neighboring gene uncharacterized LOC106140753 Neighboring gene uncharacterized LOC106140629 Neighboring gene uncharacterized LOC106140621

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032362555.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilAmyTran1.1 Primary Assembly

Genomic

  1. NC_083530.1 Reference ilAmyTran1.1 Primary Assembly

    Range
    3107126..3171139
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060952071.1 → XP_060808054.1  irregular chiasm C-roughest protein isoform X1

  2. XM_060952073.1 → XP_060808056.1  irregular chiasm C-roughest protein isoform X2

  3. XM_060952072.1 → XP_060808055.1  irregular chiasm C-roughest protein isoform X1

Nucleotide Protein
Heading Accession and Version

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