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LOC106127202 polypeptide N-acetylgalactosaminyltransferase 2-like [ Papilio xuthus (Asian swallowtail) ]

Gene ID: 106127202, updated on 1-Aug-2024

Summary

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Gene symbol
LOC106127202
Gene description
polypeptide N-acetylgalactosaminyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Papilio xuthus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio
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Genomic context

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See LOC106127202 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Pxut_1.0 (GCF_000836235.1) Unplaced Scaffold NW_013529697.1 (1288283..1339119)

NW_013529697.1Genomic Context describing neighboring genes Neighboring gene nidogen-1 Neighboring gene kinesin-like protein CG14535 Neighboring gene ATP-binding cassette sub-family G member 1-like Neighboring gene ATP-binding cassette sub-family G member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013529697.1 Unplaced Scaffold Reference Pxut_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive microarray-based analysis for stage-specific larval camouflage pattern-associated genes in the swallowtail butterfly, Papilio xuthus. Futahashi R, et al. BMC Biol, 2012 May 31. PMID 22651552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2-like
Names
polypeptide GalNAc transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papilio xuthus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pxut_1.0

Genomic

  1. NW_013529697.1 Reference Pxut_1.0

    Range
    1288283..1339119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013325267.1 → XP_013180721.1  polypeptide N-acetylgalactosaminyltransferase 2-like isoform X1

    UniProtKB/TrEMBL
    A0AAJ6ZX41
    Conserved Domains (4) summary
    cd02510
    Location:133 → 428
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:128 → 426
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:450 → 554
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:450 → 552
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_013325274.1 → XP_013180728.1  polypeptide N-acetylgalactosaminyltransferase 2-like isoform X2

    UniProtKB/TrEMBL
    A0AAJ7EKF8
    Conserved Domains (4) summary
    cd02510
    Location:130 → 425
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:125 → 423
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:447 → 551
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:447 → 549
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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