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LOC106124795 carotenoid isomerooxygenase-like [ Papilio xuthus (Asian swallowtail) ]

Gene ID: 106124795, updated on 1-Aug-2024

Summary

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Gene symbol
LOC106124795
Gene description
carotenoid isomerooxygenase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Papilio xuthus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio
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Genomic context

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See LOC106124795 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Pxut_1.0 (GCF_000836235.1) Unplaced Scaffold NW_013529697.1 (2026025..2032603)

NW_013529697.1Genomic Context describing neighboring genes Neighboring gene malate dehydrogenase-like Neighboring gene carotenoid isomerooxygenase-like Neighboring gene neuropeptides capa receptor-like Neighboring gene neuromedin-U receptor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013529697.1 Unplaced Scaffold Reference Pxut_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papilio xuthus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pxut_1.0

Genomic

  1. NW_013529697.1 Reference Pxut_1.0

    Range
    2026025..2032603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013321766.1 → XP_013177220.1  carotenoid isomerooxygenase-like

    UniProtKB/TrEMBL
    A0A194Q067, A0AAJ6ZQM1
    Conserved Domains (1) summary
    pfam03055
    Location:24 → 504
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

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