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Pgant5 polypeptide N-acetylgalactosaminyltransferase 5 [ Papilio polytes (common Mormon) ]

Gene ID: 106110855, updated on 24-May-2024

Summary

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Gene symbol
Pgant5
Gene description
polypeptide N-acetylgalactosaminyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Papilio polytes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio
Orthologs
fruit fly all
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Genomic context

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See Pgant5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Ppol_1.0 (GCF_000836215.1) Unplaced Scaffold NW_013525013.1 (2702354..2718499, complement)

NW_013525013.1Genomic Context describing neighboring genes Neighboring gene potassium channel AKT3-like Neighboring gene mitogen-activated protein kinase kinase kinase 7-like Neighboring gene solute carrier family 41 member 1-like Neighboring gene ribosomal protein L37A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013525013.1 Unplaced Scaffold Reference Ppol_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papilio polytes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ppol_1.0 Primary Assembly

Genomic

  1. NW_013525013.1 Reference Ppol_1.0 Primary Assembly

    Range
    2702354..2718499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013292799.1 → XP_013148253.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X2

    Conserved Domains (4) summary
    cd02510
    Location:180 → 480
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:493 → 611
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:491 → 609
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:177 → 411
    Glyco_tranf_2_3; Glycosyltransferase like family 2

  2. XM_013292797.1 → XP_013148251.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    Conserved Domains (4) summary
    cd02510
    Location:180 → 480
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:493 → 611
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:491 → 609
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:177 → 409
    Glyco_tranf_2_3; Glycosyltransferase like family 2

  3. XM_013292798.1 → XP_013148252.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    Conserved Domains (4) summary
    cd02510
    Location:180 → 480
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:493 → 611
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:491 → 609
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:177 → 409
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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