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LOC106105826 transmembrane and TPR repeat-containing protein 1-like [ Papilio polytes (common Mormon) ]

Gene ID: 106105826, updated on 22-Oct-2023

Summary

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Gene symbol
LOC106105826
Gene description
transmembrane and TPR repeat-containing protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Papilio polytes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio
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Genomic context

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See LOC106105826 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Ppol_1.0 (GCF_000836215.1) Unplaced Scaffold NW_013526471.1 (556012..635738, complement)

NW_013526471.1Genomic Context describing neighboring genes Neighboring gene acetylcholinesterase-like Neighboring gene forkhead box protein N2-like Neighboring gene bombyxin A-1 homolog Neighboring gene polyprenol reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013526471.1 Unplaced Scaffold Reference Ppol_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papilio polytes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ppol_1.0 Primary Assembly

Genomic

  1. NW_013526471.1 Reference Ppol_1.0 Primary Assembly

    Range
    556012..635738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013286287.1 → XP_013141741.1  transmembrane and TPR repeat-containing protein 1-like

    Conserved Domains (5) summary
    smart00028
    Location:469 → 502
    TPR; Tetratricopeptide repeats
    COG0457
    Location:450 → 704
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:469 → 497
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:278 → 352
    DUF1736; Domain of unknown function (DUF1736)
    pfam13181
    Location:534 → 566
    TPR_8; Tetratricopeptide repeat
Nucleotide Protein
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