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LOC106098139 mannose-binding protein C [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 106098139, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106098139
Gene description
mannose-binding protein C
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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Genomic context

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See LOC106098139 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
5
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (45727348..45729873)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (52888216..52890737, complement)

Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene mannose-binding protein C Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene mannose-binding protein C Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    45727348..45729873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019361794.2 → XP_019217339.1  mannose-binding protein C

    UniProtKB/TrEMBL
    I3JQN4
Nucleotide Protein
Heading Accession and Version

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