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LOC106096373 glutamic acid-rich protein [ Stomoxys calcitrans (stable fly) ]

Gene ID: 106096373, updated on 10-May-2024

Summary

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Gene symbol
LOC106096373
Gene description
glutamic acid-rich protein
See related
EnsemblRapid:ENSXCRG00005019561
Gene type
protein coding
RefSeq status
MODEL
Organism
Stomoxys calcitrans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys
Orthologs
fruit fly all
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Genomic context

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See LOC106096373 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_08 current idStoCalc2.1 (GCF_963082655.1) 5 NC_081556.1 (109911620..109949583)
100 previous assembly Stomoxys_calcitrans-1.0.1 (GCF_001015335.1) Unplaced Scaffold NW_013171871.1 (2024757..2061224, complement)

Chromosome 5 - NC_081556.1Genomic Context describing neighboring genes Neighboring gene transcription factor grauzone Neighboring gene zinc finger protein 208 Neighboring gene uncharacterized LOC106095859 Neighboring gene uncharacterized LOC106095831

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamic acid-rich protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963082655.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idStoCalc2.1

Genomic

  1. NC_081556.1 Reference idStoCalc2.1

    Range
    109911620..109949583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013264097.2 → XP_013119551.2  glutamic acid-rich protein

    Related
    ENSXCRP00005023663.1, ENSXCRT00005029764.1

RNA

  1. XR_009398368.1 RNA Sequence

  2. XR_001222885.2 RNA Sequence

  3. XR_001222886.2 RNA Sequence

  4. XR_009398370.1 RNA Sequence

  5. XR_009398371.1 RNA Sequence

  6. XR_009398369.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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