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rt Protein O-mannosyltransferase rt [ Stomoxys calcitrans (stable fly) ]

Gene ID: 106089788, updated on 22-May-2024

Summary

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Gene symbol
rt
Gene description
Protein O-mannosyltransferase rt
See related
EnsemblRapid:ENSXCRG00005016858
Gene type
protein coding
RefSeq status
MODEL
Organism
Stomoxys calcitrans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_08 current idStoCalc2.1 (GCF_963082655.1) 1 NC_081552.1 (9098107..9107183)
100 previous assembly Stomoxys_calcitrans-1.0.1 (GCF_001015335.1) Unplaced Scaffold NW_013172619.1 (280829..290224, complement)

Chromosome 1 - NC_081552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106091774 Neighboring gene Allatostatin C receptor 1 Neighboring gene uncharacterized LOC106089778 Neighboring gene uncharacterized LOC106089780

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963082655.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idStoCalc2.1

Genomic

  1. NC_081552.1 Reference idStoCalc2.1

    Range
    9098107..9107183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013255773.2 → XP_013111227.1  protein O-mannosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1I8NS44
    Related
    ENSXCRP00005020621.1, ENSXCRT00005025687.1
    Conserved Domains (4) summary
    smart00472
    Location:475 → 531
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:202 → 898
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:201 → 444
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:694 → 896
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase

  2. XM_013255774.2 → XP_013111228.1  protein O-mannosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1I8NS45
    Conserved Domains (4) summary
    smart00472
    Location:469 → 525
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:196 → 892
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:195 → 438
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:688 → 890
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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