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LOC106073373 chondroitin sulfate synthase 2-like [ Biomphalaria glabrata ]

Gene ID: 106073373, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106073373
Gene description
chondroitin sulfate synthase 2-like
See related
VectorBase:BGLAX_034130; EnsemblRapid:ENSHHTG00000026403
Gene type
protein coding
RefSeq status
MODEL
Organism
Biomphalaria glabrata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea; Planorbidae; Biomphalaria
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Genomic context

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See LOC106073373 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_05 current xgBioGlab47.1 (GCF_947242115.1) 1 NC_074711.1 (22300155..22314950)
100 previous assembly ASM45736v1 (GCF_000457365.1) Linkage Group LG8 Unlocalized Scaffold NW_013193550.1 (203298..218695, complement)

Chromosome 1 - NC_074711.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome regulatory subunit 8 Neighboring gene chondroitin sulfate synthase 2-like Neighboring gene cobalamin binding intrinsic factor-like Neighboring gene cobalamin binding intrinsic factor-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947242115.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgBioGlab47.1

Genomic

  1. NC_074711.1 Reference xgBioGlab47.1

    Range
    22300155..22314950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056028663.1 → XP_055884638.1  chondroitin sulfate synthase 2-like

    UniProtKB/TrEMBL
    A0A9U8EJ31
    Related
    ENSHHTP00000034273.1, ENSHHTT00000051083.1

  2. XM_056028652.1 → XP_055884627.1  chondroitin sulfate synthase 2-like

    UniProtKB/TrEMBL
    A0A9U8EJ31

  3. XM_013233908.2 → XP_013089362.2  chondroitin sulfate synthase 2-like

    UniProtKB/TrEMBL
    A0A9U8EJ31

  4. XM_013233923.2 → XP_013089377.2  chondroitin sulfate synthase 2-like

    UniProtKB/TrEMBL
    A0A9U8EJ31

  5. XM_013233916.2 → XP_013089370.2  chondroitin sulfate synthase 2-like

    UniProtKB/TrEMBL
    A0A9U8EJ31
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases