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LOC106060988 mediator of RNA polymerase II transcription subunit 23-like [ Biomphalaria glabrata ]

Gene ID: 106060988, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106060988
Gene description
mediator of RNA polymerase II transcription subunit 23-like
See related
VectorBase:BGLAX_042188; EnsemblRapid:ENSHHTG00000009060
Gene type
protein coding
RefSeq status
MODEL
Organism
Biomphalaria glabrata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea; Planorbidae; Biomphalaria
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Genomic context

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See LOC106060988 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2023_05 current xgBioGlab47.1 (GCF_947242115.1) 5 NC_074715.1 (34992531..35016873, complement)
100 previous assembly ASM45736v1 (GCF_000457365.1) Linkage Group LG4 Unlocalized Scaffold NW_013193375.1 (217725..241724)

Chromosome 5 - NC_074715.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106061082 Neighboring gene probable tubulin polyglutamylase ttll-15 Neighboring gene trimeric intracellular cation channel type 1B.2-like Neighboring gene trimeric intracellular cation channel type 1B.1-like Neighboring gene uncharacterized LOC129926277 Neighboring gene hippocampus abundant transcript 1 protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947242115.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgBioGlab47.1

Genomic

  1. NC_074715.1 Reference xgBioGlab47.1

    Range
    34992531..35016873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013219034.2 → XP_013074488.2  mediator of RNA polymerase II transcription subunit 23-like isoform X1

    UniProtKB/TrEMBL
    A0A9U8E6D5
    Related
    ENSHHTP00000011181.1, ENSHHTT00000017421.1

  2. XM_013219057.2 → XP_013074511.2  mediator of RNA polymerase II transcription subunit 23-like isoform X2

    UniProtKB/TrEMBL
    A0A9W3AJ42
    Related
    ENSHHTP00000011167.1, ENSHHTT00000017406.1

  3. XM_013219049.2 → XP_013074503.2  mediator of RNA polymerase II transcription subunit 23-like isoform X2

    UniProtKB/TrEMBL
    A0A9W3AJ42

  4. XM_056031165.1 → XP_055887140.1  mediator of RNA polymerase II transcription subunit 23-like isoform X2

    UniProtKB/TrEMBL
    A0A9W3AJ42
    Related
    ENSHHTP00000011106.1, ENSHHTT00000017340.1

  5. XM_056031163.1 → XP_055887138.1  mediator of RNA polymerase II transcription subunit 23-like isoform X2

    UniProtKB/TrEMBL
    A0A9W3AJ42

  6. XM_013219075.2 → XP_013074529.2  mediator of RNA polymerase II transcription subunit 23-like isoform X2

    UniProtKB/TrEMBL
    A0A9W3AJ42
    Related
    ENSHHTP00000011133.1, ENSHHTT00000017371.1
Nucleotide Protein
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