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LOC106059583 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Biomphalaria glabrata ]

Gene ID: 106059583, updated on 14-Nov-2024

Summary

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Gene symbol
LOC106059583
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
See related
VectorBase:BGLAX_042328; EnsemblRapid:ENSHHTG00000045695
Gene type
protein coding
RefSeq status
MODEL
Organism
Biomphalaria glabrata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea; Planorbidae; Biomphalaria
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Genomic context

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See LOC106059583 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_05 current xgBioGlab47.1 (GCF_947242115.1) 11 NC_074721.1 (38078277..38088686)
100 previous assembly ASM45736v1 (GCF_000457365.1) Unplaced Scaffold NW_013218606.1 (34367..38688, complement)

Chromosome 11 - NC_074721.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene proteasome subunit alpha type-2-like Neighboring gene fibrinogen-like protein A Neighboring gene fibropellin-3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in core 1 O-glycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947242115.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgBioGlab47.1

Genomic

  1. NC_074721.1 Reference xgBioGlab47.1

    Range
    38078277..38088686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056005036.1 → XP_055861011.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A9W2YEA4
    Related
    ENSHHTP00000058711.1, ENSHHTT00000088542.1
Nucleotide Protein
Heading Accession and Version

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