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LOC106055760 heparan-sulfate 6-O-sulfotransferase 3-B-like [ Biomphalaria glabrata ]

Gene ID: 106055760, updated on 26-Mar-2024

Summary

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Gene symbol
LOC106055760
Gene description
heparan-sulfate 6-O-sulfotransferase 3-B-like
See related
VectorBase:BGLAX_050928; EnsemblRapid:ENSHHTG00000013205
Gene type
protein coding
RefSeq status
MODEL
Organism
Biomphalaria glabrata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea; Planorbidae; Biomphalaria
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Genomic context

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See LOC106055760 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_05 current xgBioGlab47.1 (GCF_947242115.1) 15 NC_074725.1 (14618128..14627823, complement)
100 previous assembly ASM45736v1 (GCF_000457365.1) Linkage Group LG29 Unlocalized Scaffold NW_013193950.1 (145335..150522)

Chromosome 15 - NC_074725.1Genomic Context describing neighboring genes Neighboring gene serine-rich adhesin for platelets-like Neighboring gene uncharacterized LOC106055768 Neighboring gene uncharacterized LOC106055767 Neighboring gene uncharacterized LOC106055766 Neighboring gene uncharacterized LOC129923211

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 3-B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947242115.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgBioGlab47.1

Genomic

  1. NC_074725.1 Reference xgBioGlab47.1

    Range
    14618128..14627823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056013211.1 → XP_055869186.1  heparan-sulfate 6-O-sulfotransferase 3-B-like

    UniProtKB/TrEMBL
    A0A9W2Z287
    Related
    ENSHHTP00000016939.1, ENSHHTT00000025434.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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