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LOC106055670 phospholipid scramblase 2-like [ Biomphalaria glabrata ]

Gene ID: 106055670, updated on 26-Mar-2024

Summary

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Gene symbol
LOC106055670
Gene description
phospholipid scramblase 2-like
See related
VectorBase:BGLAX_035441; EnsemblRapid:ENSHHTG00000010367
Gene type
protein coding
RefSeq status
MODEL
Organism
Biomphalaria glabrata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea; Planorbidae; Biomphalaria
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Genomic context

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See LOC106055670 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_05 current xgBioGlab47.1 (GCF_947242115.1) 15 NC_074725.1 (13845395..13855930)
100 previous assembly ASM45736v1 (GCF_000457365.1) Linkage Group LG29 Unlocalized Scaffold NW_013193946.1 (471260..481126, complement)

Chromosome 15 - NC_074725.1Genomic Context describing neighboring genes Neighboring gene filamin-C-like Neighboring gene uncharacterized LOC129923191 Neighboring gene uncharacterized LOC129923189 Neighboring gene fibronectin type-III domain-containing protein 3a-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid scramblase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in plasma membrane phospholipid scrambling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid scramblase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947242115.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgBioGlab47.1

Genomic

  1. NC_074725.1 Reference xgBioGlab47.1

    Range
    13845395..13855930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013212039.2 → XP_013067493.1  phospholipid scramblase 2-like

    UniProtKB/TrEMBL
    A0A2C9JF58
    Related
    ENSHHTP00000013077.1, ENSHHTT00000019887.1
    Conserved Domains (1) summary
    pfam03803
    Location:115 → 336
    Scramblase; Scramblase

  2. XM_013212041.2 → XP_013067495.1  phospholipid scramblase 2-like

    UniProtKB/TrEMBL
    A0A2C9JF58
    Conserved Domains (1) summary
    pfam03803
    Location:115 → 336
    Scramblase; Scramblase

  3. XM_013212040.2 → XP_013067494.1  phospholipid scramblase 2-like

    UniProtKB/TrEMBL
    A0A2C9JF58
    Conserved Domains (1) summary
    pfam03803
    Location:115 → 336
    Scramblase; Scramblase

  4. XM_056012578.1 → XP_055868553.1  phospholipid scramblase 2-like

    UniProtKB/TrEMBL
    A0A2C9JF58
Nucleotide Protein
Heading Accession and Version

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