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CPT1B carnitine palmitoyltransferase 1B [ Anser cygnoides (Swan goose) ]

Gene ID: 106048146, updated on 7-Aug-2024

Summary

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Gene symbol
CPT1B
Gene description
carnitine palmitoyltransferase 1B
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See CPT1B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (657887..666194)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927950.1 (289311..299700)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase CyaB-like Neighboring gene choline kinase beta Neighboring gene rheacalcin-1-like Neighboring gene uncharacterized LOC106048147 Neighboring gene struthiocalcin-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, muscle isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    657887..666194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066993148.1 → XP_066849249.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X1

  2. XM_066993164.1 → XP_066849265.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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