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SPAM1 sperm adhesion molecule 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106047621, updated on 5-Aug-2024

Summary

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Gene symbol
SPAM1
Gene description
sperm adhesion molecule 1
See related
EnsemblRapid:ENSACDG00000003205
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human all
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Genomic context

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See SPAM1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (23988511..24026845, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927695.1 (2538263..2543800)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 37 Neighboring gene ADP-ribosylation factor-like protein 8B Neighboring gene hyaluronidase-1-like Neighboring gene hyaluronidase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase PH-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    23988511..24026845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066990597.1 → XP_066846698.1  hyaluronidase PH-20

  2. XM_013199200.3 → XP_013054654.2  hyaluronidase PH-20

  3. XM_066990601.1 → XP_066846702.1  hyaluronidase PH-20

  4. XM_066990594.1 → XP_066846695.1  hyaluronidase PH-20

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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