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TMED6 transmembrane p24 trafficking protein 6 [ Anser cygnoides (Swan goose) ]

Gene ID: 106046631, updated on 5-Aug-2024

Summary

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Gene symbol
TMED6
Gene description
transmembrane p24 trafficking protein 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See TMED6 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 12 NC_089884.1 (1249620..1253543)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927894.1 (1166289..1171189)

Chromosome 12 - NC_089884.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 type B Neighboring gene telomeric repeat binding factor 2 Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene component of oligomeric golgi complex 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089884.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    1249620..1253543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048050493.2 → XP_047906450.2  transmembrane emp24 domain-containing protein 6 isoform X3

  2. XM_048050492.2 → XP_047906449.2  transmembrane emp24 domain-containing protein 6 isoform X2

  3. XM_048050491.2 → XP_047906448.2  transmembrane emp24 domain-containing protein 6 isoform X1

Nucleotide Protein
Heading Accession and Version

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