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PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma [ Anser cygnoides (Swan goose) ]

Gene ID: 106045672, updated on 10-Oct-2024

Summary

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Gene symbol
PIP5K1C
Gene description
phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
See related
EnsemblRapid:ENSACDG00000006305
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See PIP5K1C in Genome Data Viewer
Location:
chromosome: 27
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 27 NC_089899.1 (4641701..4684006)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927760.1 (979901..1010690, complement)

Chromosome 27 - NC_089899.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family A member 3 Neighboring gene tight junction protein 3 Neighboring gene cactin, spliceosome C complex subunit Neighboring gene thromboxane A2 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089899.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    4641701..4684006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066983987.1 → XP_066840088.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X6

  2. XM_066983981.1 → XP_066840082.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1

  3. XM_066983984.1 → XP_066840085.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3

  4. XM_066983983.1 → XP_066840084.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3

  5. XM_066983985.1 → XP_066840086.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4

  6. XM_066983982.1 → XP_066840083.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2

  7. XM_066983986.1 → XP_066840087.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X5

    UniProtKB/TrEMBL
    A0A8B9E6M5
Nucleotide Protein
Heading Accession and Version

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