U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GPC6 glypican 6 [ Anser cygnoides (Swan goose) ]

Gene ID: 106045356, updated on 5-Aug-2024

Summary

Gene symbol
GPC6
Gene description
glypican 6
See related
EnsemblRapid:ENSACDG00000013347
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (157576568..158402091, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927726.1 (17235..580706)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125183831 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene uncharacterized LOC106045357 Neighboring gene dopachrome tautomerase Neighboring gene glypican 5 Neighboring gene basic salivary proline-rich protein 2-like

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    157576568..158402091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066986905.1XP_066843006.1  glypican-6 isoform X1

  2. XM_066986906.1XP_066843007.1  glypican-6 isoform X2