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CPTP ceramide-1-phosphate transfer protein [ Anser cygnoides (Swan goose) ]

Gene ID: 106044606, updated on 7-Aug-2024

Summary

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Gene symbol
CPTP
Gene description
ceramide-1-phosphate transfer protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See CPTP in Genome Data Viewer
Location:
chromosome: 23
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 23 NC_089895.1 (5763880..5765765)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927702.1 (4056787..4058518)

Chromosome 23 - NC_089895.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 6-like Neighboring gene integrator complex subunit 11 Neighboring gene taste 1 receptor member 3 Neighboring gene dishevelled segment polarity protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide-1-phosphate transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089895.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    5763880..5765765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048067598.2 → XP_047923555.1  ceramide-1-phosphate transfer protein

    UniProtKB/TrEMBL
    A0A8B9E6H6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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