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ACOD1 aconitate decarboxylase 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106043926, updated on 7-Aug-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
EnsemblRapid:ENSACDG00000015081
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (167264425..167291046, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025928020.1 (80911..115307)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene CLN5 intracellular trafficking protein Neighboring gene glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Neighboring gene uncharacterized LOC106043929 Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene uncharacterized LOC136789757

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aconitate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    167264425..167291046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048054424.2 → XP_047910381.2  cis-aconitate decarboxylase isoform X2

  2. XM_048054427.2 → XP_047910384.2  cis-aconitate decarboxylase isoform X2

  3. XM_013193682.3 → XP_013049136.3  cis-aconitate decarboxylase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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