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LPIN3 lipin 3 [ Anser cygnoides (Swan goose) ]

Gene ID: 106043477, updated on 5-Aug-2024

Summary

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Gene symbol
LPIN3
Gene description
lipin 3
See related
EnsemblRapid:ENSACDG00000004957
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See LPIN3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 16 NC_089888.1 (14379607..14396035)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927817.1 (1667474..1683938)

Chromosome 16 - NC_089888.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase I Neighboring gene phospholipase C gamma 1 Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene elastin microfibril interfacer 3 Neighboring gene ribophorin II Neighboring gene growth hormone releasing hormone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089888.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    14379607..14396035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066978539.1 → XP_066834640.1  phosphatidate phosphatase LPIN3 isoform X6

  2. XM_066978542.1 → XP_066834643.1  phosphatidate phosphatase LPIN3 isoform X6

  3. XM_066978537.1 → XP_066834638.1  phosphatidate phosphatase LPIN3 isoform X5

  4. XM_066978536.1 → XP_066834637.1  phosphatidate phosphatase LPIN3 isoform X4

  5. XM_066978541.1 → XP_066834642.1  phosphatidate phosphatase LPIN3 isoform X6

  6. XM_066978535.1 → XP_066834636.1  phosphatidate phosphatase LPIN3 isoform X3

  7. XM_066978534.1 → XP_066834635.1  phosphatidate phosphatase LPIN3 isoform X2

  8. XM_066978533.1 → XP_066834634.1  phosphatidate phosphatase LPIN3 isoform X1

  9. XM_066978538.1 → XP_066834639.1  phosphatidate phosphatase LPIN3 isoform X6

Nucleotide Protein
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