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LPCAT2 lysophosphatidylcholine acyltransferase 2 [ Anser cygnoides (Swan goose) ]

Gene ID: 106043072, updated on 7-Aug-2024

Summary

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Gene symbol
LPCAT2
Gene description
lysophosphatidylcholine acyltransferase 2
See related
EnsemblRapid:ENSACDG00000011626
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See LPCAT2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 12 NC_089884.1 (15044995..15074699, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927769.1 (560391..590155)

Chromosome 12 - NC_089884.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125184621 Neighboring gene uncharacterized LOC106043088 Neighboring gene sodium-dependent noradrenaline transporter Neighboring gene calpain small subunit 1-like Neighboring gene matrix metallopeptidase 2 Neighboring gene uncharacterized LOC136791798

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerophosphocholine O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lysophosphatidic acid acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089884.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    15044995..15074699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048078722.2 → XP_047934679.1  lysophosphatidylcholine acyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ED96

  2. XM_067004523.1 → XP_066860624.1  lysophosphatidylcholine acyltransferase 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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