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MTMR4 myotubularin related protein 4 [ Anser cygnoides (Swan goose) ]

Gene ID: 106041058, updated on 10-Oct-2024

Summary

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Gene symbol
MTMR4
Gene description
myotubularin related protein 4
See related
EnsemblRapid:ENSACDG00000003272
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See MTMR4 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 18 NC_089890.1 (1874024..1927006, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927704.1 (220242..273914, complement)

Chromosome 18 - NC_089890.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 43 Neighboring gene heat shock transcription factor 5 Neighboring gene uncharacterized LOC106041059 Neighboring gene caspase-1-like Neighboring gene abhydrolase domain containing 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089890.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    1874024..1927006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048068077.2 → XP_047924034.1  myotubularin-related protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8B9EPV8

  2. XM_048068079.2 → XP_047924036.1  myotubularin-related protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8B9EPV8

  3. XM_066979422.1 → XP_066835523.1  myotubularin-related protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8B9EPV8

  4. XM_048068078.2 → XP_047924035.1  myotubularin-related protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8B9EPV8

  5. XM_013189292.3 → XP_013044746.3  myotubularin-related protein 4 isoform X1

Nucleotide Protein
Heading Accession and Version

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