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SLC35C1 solute carrier family 35 member C1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106040782, updated on 7-Aug-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
See related
EnsemblRapid:ENSACDG00000002653
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 5 NC_089877.1 (34048297..34052845)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927692.1 (2026318..2030578, complement)

Chromosome 5 - NC_089877.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 263-like Neighboring gene uncharacterized LOC106043358 Neighboring gene carbohydrate sulfotransferase 1 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene Frey regulator of sperm-oocyte fusion 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-fucose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089877.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    34048297..34052845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066997841.1 → XP_066853942.1  GDP-fucose transporter 1

Nucleotide Protein
Heading Accession and Version

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