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CACNA2D3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 [ Anser cygnoides (Swan goose) ]

Gene ID: 106040528, updated on 10-Oct-2024

Summary

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Gene symbol
CACNA2D3
Gene description
calcium voltage-gated channel auxiliary subunit alpha2delta 3
See related
EnsemblRapid:ENSACDG00000008420
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See CACNA2D3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
55
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 10 NC_089882.1 (1074369..1605615, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927834.1 (385988..925701)

Chromosome 10 - NC_089882.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136791659 Neighboring gene uncharacterized LOC106040522 Neighboring gene leucine rich repeats and transmembrane domains 1 Neighboring gene selenoprotein K Neighboring gene interleukin 17 receptor B Neighboring gene actin related protein 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel subunit alpha-2/delta-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089882.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    1074369..1605615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013188465.3 → XP_013043919.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X14

    See identical proteins and their annotated locations for XP_013043919.1

    UniProtKB/TrEMBL
    A0A8B9IKH3
    Related
    ENSACDP00000014591.1
    Conserved Domains (4) summary
    cd01463
    Location:241 → 424
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:451 → 547
    Cache_1; Cache domain
    pfam08399
    Location:112 → 228
    VWA_N; VWA N-terminal
    pfam08473
    Location:560 → 632
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

  2. XM_048047530.2 → XP_047903487.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X8

  3. XM_048047531.2 → XP_047903488.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X8

  4. XM_067003186.1 → XP_066859287.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X5

  5. XM_013188467.3 → XP_013043921.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X9

  6. XM_048047522.2 → XP_047903479.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1

  7. XM_048047527.2 → XP_047903484.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X6

  8. XM_067003189.1 → XP_066859290.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X9

  9. XM_048047521.2 → XP_047903478.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1

  10. XM_048047525.2 → XP_047903482.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X4

  11. XM_067003187.1 → XP_066859288.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X7

  12. XM_048047523.2 → XP_047903480.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X2

  13. XM_067003190.1 → XP_066859291.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X9

  14. XM_048047537.2 → XP_047903494.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X9

  15. XM_067003185.1 → XP_066859286.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X3

  16. XM_048047532.2 → XP_047903489.2  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X9

  17. XM_048047538.2 → XP_047903495.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X10

  18. XM_067003193.1 → XP_066859294.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X12

  19. XM_067003194.1 → XP_066859295.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X13

  20. XM_067003192.1 → XP_066859293.1  voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X11

RNA

  1. XR_007158072.2 RNA Sequence

  2. XR_007158070.2 RNA Sequence

  3. XR_007158069.2 RNA Sequence

Nucleotide Protein
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