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AGXT alanine--glyoxylate aminotransferase [ Anser cygnoides (Swan goose) ]

Gene ID: 106039153, updated on 18-Sep-2024

Summary

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Gene symbol
AGXT
Gene description
alanine--glyoxylate aminotransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See AGXT in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 9 NC_089881.1 (11997858..12001925)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927757.1 (1802877..1806946, complement)

Chromosome 9 - NC_089881.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136791455 Neighboring gene ILK associated serine/threonine phosphatase Neighboring gene kinesin family member 1A Neighboring gene mab-21 like 4 Neighboring gene sushi, nidogen and EGF like domains 1 Neighboring gene mitochondrial transcription termination factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine--glyoxylate aminotransferase
Names
alanine--glyoxylate and serine--pyruvate aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089881.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    11997858..12001925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067002439.1 → XP_066858540.1  alanine--glyoxylate aminotransferase isoform X6

  2. XM_067002436.1 → XP_066858537.1  alanine--glyoxylate aminotransferase isoform X1

  3. XM_067002437.1 → XP_066858538.1  alanine--glyoxylate aminotransferase isoform X3

  4. XM_067002438.1 → XP_066858539.1  alanine--glyoxylate aminotransferase isoform X4

  5. XM_048077381.2 → XP_047933338.1  alanine--glyoxylate aminotransferase isoform X7

    UniProtKB/TrEMBL
    A0A8B9DKV6

  6. XM_048077378.2 → XP_047933335.1  alanine--glyoxylate aminotransferase isoform X2

  7. XM_048077380.2 → XP_047933337.1  alanine--glyoxylate aminotransferase isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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