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PGM2 phosphoglucomutase 2 [ Anser cygnoides (Swan goose) ]

Gene ID: 106039078, updated on 7-Aug-2024

Summary

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Gene symbol
PGM2
Gene description
phosphoglucomutase 2
See related
EnsemblRapid:ENSACDG00000005348
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See PGM2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 4 NC_089876.1 (23628498..23670825)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927728.1 (1150031..1192314)

Chromosome 4 - NC_089876.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136790660 Neighboring gene NACHT and WD repeat domain containing 2 Neighboring gene uncharacterized LOC106039113 Neighboring gene chromosome 4 C4orf19 homolog Neighboring gene RELT like 1 Neighboring gene TBC1 domain family member 1 Neighboring gene KLF transcription factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopentomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine ribonucleoside salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphopentomutase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089876.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    23628498..23670825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048072976.2 → XP_047928933.1  phosphopentomutase isoform X2

  2. XM_048072975.2 → XP_047928932.1  phosphopentomutase isoform X1

    UniProtKB/TrEMBL
    A0A8B9IDZ4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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