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C1GALT1C1 C1GALT1 specific chaperone 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106038520, updated on 5-Aug-2024

Summary

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Gene symbol
C1GALT1C1
Gene description
C1GALT1 specific chaperone 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See C1GALT1C1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 13 NC_089885.1 (656870..658625, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927715.1 (5802349..5804129)

Chromosome 13 - NC_089885.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125183579 Neighboring gene cullin 4B Neighboring gene MCTS1 re-initiation and release factor Neighboring gene glutamate ionotropic receptor AMPA type subunit 3 Neighboring gene uncharacterized LOC106038548

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089885.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    656870..658625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048070685.2 → XP_047926642.1  C1GALT1-specific chaperone 1

    UniProtKB/TrEMBL
    A0A8B9EMB4

  2. XM_013185075.3 → XP_013040529.1  C1GALT1-specific chaperone 1

    See identical proteins and their annotated locations for XP_013040529.1

    UniProtKB/TrEMBL
    A0A8B9EMB4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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