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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Anser cygnoides (Swan goose) ]

Gene ID: 106038338, updated on 10-Oct-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
EnsemblRapid:ENSACDG00000005266
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (95583065..95623787, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927671.1 (9426632..9474609)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106038484 Neighboring gene uncharacterized LOC106038490 Neighboring gene collagen type VIII alpha 1 chain Neighboring gene uncharacterized LOC125182110 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene coproporphyrinogen oxidase Neighboring gene transcription termination factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    95583065..95623787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048058172.2 → XP_047914129.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

  2. XM_066990393.1 → XP_066846494.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  3. XM_048058162.2 → XP_047914119.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

  4. XM_048058161.2 → XP_047914118.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X6

  5. XM_048058163.2 → XP_047914120.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  6. XM_066990391.1 → XP_066846492.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8B9IH89

  7. XM_048058165.2 → XP_047914122.2  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

  8. XM_066990392.1 → XP_066846493.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

    UniProtKB/TrEMBL
    A0A8B9IHL9

  9. XM_048058173.2 → XP_047914130.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

  10. XM_048058166.2 → XP_047914123.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  11. XM_048058171.2 → XP_047914128.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

Nucleotide Protein
Heading Accession and Version

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