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B4GALT4 beta-1,4-galactosyltransferase 4 [ Anser cygnoides (Swan goose) ]

Gene ID: 106037583, updated on 7-Aug-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
See related
EnsemblRapid:ENSACDG00000004070
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (99154723..99183380, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927671.1 (5863067..5891692)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene transmembrane protein 39A Neighboring gene uncharacterized LOC106037564 Neighboring gene chromodomain helicase DNA binding protein 1 like Neighboring gene VANGL planar cell polarity protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    99154723..99183380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048057966.2 → XP_047913923.2  beta-1,4-galactosyltransferase 4

  2. XM_048057964.2 → XP_047913921.2  beta-1,4-galactosyltransferase 4

  3. XM_013183540.3 → XP_013038994.3  beta-1,4-galactosyltransferase 4

Nucleotide Protein
Heading Accession and Version

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