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ACOX1 acyl-CoA oxidase 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106034764, updated on 6-Aug-2024

Summary

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Gene symbol
ACOX1
Gene description
acyl-CoA oxidase 1
See related
EnsemblRapid:ENSACDG00000015069
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See ACOX1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 19 NC_089891.1 (5340085..5360387)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927690.1 (6626998..6646325, complement)

Chromosome 19 - NC_089891.1Genomic Context describing neighboring genes Neighboring gene envoplakin Neighboring gene cyclin dependent kinase 3 Neighboring gene TEN1 subunit of CST complex Neighboring gene Fas binding factor 1 Neighboring gene mitochondrial ribosomal protein L38

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089891.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    5340085..5360387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066980167.1 → XP_066836268.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X2

  2. XM_066980166.1 → XP_066836267.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X1

  3. XM_066980168.1 → XP_066836269.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X5

  4. XM_013179141.3 → XP_013034595.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B9DEN3
    Conserved Domains (1) summary
    cl09933
    Location:10 → 570
    ACAD; Acyl-CoA dehydrogenase

  5. XM_013179143.3 → XP_013034597.3  peroxisomal acyl-coenzyme A oxidase 1 isoform X4

Nucleotide Protein
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