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ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106034494, updated on 7-Aug-2024

Summary

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Gene symbol
ORMDL1
Gene description
ORMDL sphingolipid biosynthesis regulator 1
See related
EnsemblRapid:ENSACDG00000004498
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See ORMDL1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 6 NC_089878.1 (5887943..5895135)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927672.1 (4209302..4217367)

Chromosome 6 - NC_089878.1Genomic Context describing neighboring genes Neighboring gene chromosome 6 C2orf88 homolog Neighboring gene myostatin Neighboring gene uncharacterized LOC106034496 Neighboring gene PMS1 homolog 1, mismatch repair system component Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene asparagine synthetase domain containing 1 Neighboring gene ASNSD1 upstream open reading frame

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ORM1-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089878.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    5887943..5895135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013178649.3 → XP_013034103.1  ORM1-like protein 1

    See identical proteins and their annotated locations for XP_013034103.1

    UniProtKB/TrEMBL
    A0A8B9ED67
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  2. XM_013178648.3 → XP_013034102.1  ORM1-like protein 1

    See identical proteins and their annotated locations for XP_013034102.1

    UniProtKB/TrEMBL
    A0A8B9ED67
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  3. XM_048058500.2 → XP_047914457.1  ORM1-like protein 1

    UniProtKB/TrEMBL
    A0A8B9ED67

  4. XM_048058501.2 → XP_047914458.1  ORM1-like protein 1

    UniProtKB/TrEMBL
    A0A8B9ED67
Nucleotide Protein
Heading Accession and Version

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