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CTBP1 C-terminal binding protein 1 [ Anser cygnoides (Swan goose) ]

Gene ID: 106034222, updated on 7-Aug-2024

Summary

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Gene symbol
CTBP1
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSACDG00000009838
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 4 NC_089876.1 (7065756..7299329, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927666.1 (10191945..10424306)

Chromosome 4 - NC_089876.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106034215 Neighboring gene uncharacterized LOC125185063 Neighboring gene uncharacterized LOC106034255 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC106034277

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089876.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    7065756..7299329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066995581.1 → XP_066851682.1  C-terminal-binding protein 1 isoform X3

  2. XM_066995580.1 → XP_066851681.1  C-terminal-binding protein 1 isoform X2

  3. XM_066995579.1 → XP_066851680.1  C-terminal-binding protein 1 isoform X1

  4. XM_048047567.2 → XP_047903524.1  C-terminal-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8B9DE29

  5. XM_048047559.2 → XP_047903516.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B9DE22, A0A8B9DE29

  6. XM_048047575.2 → XP_047903532.1  C-terminal-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8B9DE29

  7. XM_048047581.2 → XP_047903538.1  C-terminal-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8B9DE29

  8. XM_066995582.1 → XP_066851683.1  C-terminal-binding protein 1 isoform X5

Nucleotide Protein
Heading Accession and Version

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