U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ITPK1 inositol-tetrakisphosphate 1-kinase [ Anser cygnoides (Swan goose) ]

Gene ID: 106033487, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
ITPK1
Gene description
inositol-tetrakisphosphate 1-kinase
See related
EnsemblRapid:ENSACDG00000001966
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ITPK1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 5 NC_089877.1 (50360191..50505603, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927714.1 (2575184..2718525)

Chromosome 5 - NC_089877.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136790969 Neighboring gene golgin A5 Neighboring gene chromogranin A Neighboring gene uncharacterized LOC136790971 Neighboring gene lysosomal enzyme trafficking factor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,3,4-trisphosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,3,4-trisphosphate 6-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-3,4,5,6-tetrakisphosphate 1-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol trisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inositol-tetrakisphosphate 1-kinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089877.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    50360191..50505603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048070357.2 → XP_047926314.2  inositol-tetrakisphosphate 1-kinase isoform X1

  2. XM_048070359.2 → XP_047926316.2  inositol-tetrakisphosphate 1-kinase isoform X1

  3. XM_066998281.1 → XP_066854382.1  inositol-tetrakisphosphate 1-kinase isoform X3

  4. XM_048070360.2 → XP_047926317.2  inositol-tetrakisphosphate 1-kinase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.