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CHAT choline O-acetyltransferase [ Anser cygnoides (Swan goose) ]

Gene ID: 106032106, updated on 5-Aug-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
EnsemblRapid:ENSACDG00000013526
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 7 NC_089879.1 (31271185..31305616, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927736.1 (1581378..1616470, complement)

Chromosome 7 - NC_089879.1Genomic Context describing neighboring genes Neighboring gene oxoglutarate dehydrogenase L Neighboring gene chromosome 7 C10orf53 homolog Neighboring gene solute carrier family 18 member A3 Neighboring gene retinal G protein coupled receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089879.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    31271185..31305616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048074822.2 → XP_047930779.2  choline O-acetyltransferase

Nucleotide Protein
Heading Accession and Version

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